TimeXNet Web - Identify active gene networks and pathways using time-course biological data

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KEGG Pathway Enrichment

Job Name:

LPS Response in Mouse MyD88 KO BMDCs

Current Gene List:

Input Gene List

Background List:

Submitted Network

122 chart records

Note: Only the top 1000 records are shown here

Category	Term	Count	%	P-value	Benjamini
KEGG_PATHWAY	mmu05161:Hepatitis B	63	7.9	6.4e-27	1.5e-24
KEGG_PATHWAY	mmu04071:Sphingolipid signaling pathway	54	6.8	4.0e-24	4.7e-22
KEGG_PATHWAY	mmu05142:Chagas disease (American trypanosomiasis)	53	6.6	9.3e-24	7.4e-22
KEGG_PATHWAY	mmu04660:T cell receptor signaling pathway	51	6.4	1.5e-21	8.7e-20
KEGG_PATHWAY	mmu05169:Epstein-Barr virus infection	66	8.2	7.8e-20	3.7e-18
KEGG_PATHWAY	mmu05215:Prostate cancer	43	5.4	9.0e-20	3.6e-18
KEGG_PATHWAY	mmu05220:Chronic myeloid leukemia	40	5.0	1.1e-19	3.8e-18
KEGG_PATHWAY	mmu05160:Hepatitis C	54	6.8	1.7e-19	5.2e-18
KEGG_PATHWAY	mmu04722:Neurotrophin signaling pathway	51	6.4	2.8e-19	7.5e-18
KEGG_PATHWAY	mmu04210:Apoptosis	37	4.6	5.4e-19	1.3e-17
KEGG_PATHWAY	mmu05222:Small cell lung cancer	42	5.2	1.7e-18	3.6e-17
KEGG_PATHWAY	mmu05200:Pathways in cancer	101	12.6	2.4e-18	4.8e-17
KEGG_PATHWAY	mmu04917:Prolactin signaling pathway	39	4.9	2.5e-18	4.6e-17
KEGG_PATHWAY	mmu04012:ErbB signaling pathway	43	5.4	2.6e-18	4.5e-17
KEGG_PATHWAY	mmu05162:Measles	52	6.5	6.9e-18	1.1e-16
KEGG_PATHWAY	mmu05212:Pancreatic cancer	36	4.5	1.4e-17	2.1e-16
KEGG_PATHWAY	mmu05145:Toxoplasmosis	44	5.5	1.2e-16	1.6e-15
KEGG_PATHWAY	mmu04068:FoxO signaling pathway	51	6.4	6.8e-16	8.8e-15
KEGG_PATHWAY	mmu04664:Fc epsilon RI signaling pathway	35	4.4	7.2e-16	8.3e-15
KEGG_PATHWAY	mmu04620:Toll-like receptor signaling pathway	42	5.2	7.6e-16	9.2e-15
KEGG_PATHWAY	mmu04662:B cell receptor signaling pathway	34	4.2	3.1e-15	3.5e-14
KEGG_PATHWAY	mmu05210:Colorectal cancer	33	4.1	3.5e-15	3.8e-14
KEGG_PATHWAY	mmu04151:PI3K-Akt signaling pathway	85	10.6	5.0e-15	5.2e-14
KEGG_PATHWAY	mmu04066:HIF-1 signaling pathway	42	5.2	5.9e-15	5.8e-14
KEGG_PATHWAY	mmu04370:VEGF signaling pathway	32	4.0	8.1e-15	7.7e-14
KEGG_PATHWAY	mmu05223:Non-small cell lung cancer	31	3.9	9.0e-15	8.2e-14
KEGG_PATHWAY	mmu05213:Endometrial cancer	29	3.6	9.4e-15	8.3e-14
KEGG_PATHWAY	mmu05221:Acute myeloid leukemia	29	3.6	2.1e-14	1.8e-13
KEGG_PATHWAY	mmu05231:Choline metabolism in cancer	38	4.8	3.9e-14	3.2e-13
KEGG_PATHWAY	mmu04064:NF-kappa B signaling pathway	38	4.8	3.9e-14	3.2e-13
KEGG_PATHWAY	mmu05203:Viral carcinogenesis	58	7.2	6.0e-14	4.8e-13
KEGG_PATHWAY	mmu04910:Insulin signaling pathway	48	6.0	9.2e-14	7.1e-13
KEGG_PATHWAY	mmu05214:Glioma	31	3.9	1.5e-13	1.1e-12
KEGG_PATHWAY	mmu05164:Influenza A	50	6.2	1.6e-13	1.2e-12
KEGG_PATHWAY	mmu05168:Herpes simplex infection	50	6.2	1.6e-13	1.2e-12
KEGG_PATHWAY	mmu04932:Non-alcoholic fatty liver disease (NAFLD)	49	6.1	3.7e-13	2.6e-12
KEGG_PATHWAY	mmu05166:HTLV-I infection	68	8.5	4.3e-13	2.9e-12
KEGG_PATHWAY	mmu04510:Focal adhesion	57	7.1	7.9e-13	5.2e-12
KEGG_PATHWAY	mmu04668:TNF signaling pathway	41	5.1	8.2e-13	5.3e-12
KEGG_PATHWAY	mmu04919:Thyroid hormone signaling pathway	40	5.0	1.9e-12	1.2e-11
KEGG_PATHWAY	mmu04380:Osteoclast differentiation	41	5.1	4.1e-12	2.5e-11
KEGG_PATHWAY	mmu04931:Insulin resistance	39	4.9	4.3e-12	2.5e-11
KEGG_PATHWAY	mmu05211:Renal cell carcinoma	29	3.6	5.1e-12	3.0e-11
KEGG_PATHWAY	mmu04062:Chemokine signaling pathway	53	6.6	6.8e-12	3.8e-11
KEGG_PATHWAY	mmu04930:Type II diabetes mellitus	25	3.1	1.1e-11	6.2e-11
KEGG_PATHWAY	mmu05205:Proteoglycans in cancer	58	7.2	1.3e-11	7.0e-11
KEGG_PATHWAY	mmu04630:Jak-STAT signaling pathway	44	5.5	1.9e-11	1.0e-10
KEGG_PATHWAY	mmu04650:Natural killer cell mediated cytotoxicity	36	4.5	3.4e-11	1.7e-10
KEGG_PATHWAY	mmu04152:AMPK signaling pathway	42	5.2	3.4e-11	1.7e-10
KEGG_PATHWAY	mmu05230:Central carbon metabolism in cancer	28	3.5	3.7e-11	1.9e-10
KEGG_PATHWAY	mmu04666:Fc gamma R-mediated phagocytosis	33	4.1	7.4e-11	3.6e-10
KEGG_PATHWAY	mmu04014:Ras signaling pathway	57	7.1	9.2e-11	4.4e-10
KEGG_PATHWAY	mmu05206:MicroRNAs in cancer	41	5.1	9.4e-10	4.4e-9
KEGG_PATHWAY	mmu05133:Pertussis	28	3.5	1.2e-9	5.7e-9
KEGG_PATHWAY	mmu04010:MAPK signaling pathway	59	7.4	1.6e-9	7.2e-9
KEGG_PATHWAY	mmu04621:NOD-like receptor signaling pathway	24	3.0	1.9e-9	8.4e-9
KEGG_PATHWAY	mmu04914:Progesterone-mediated oocyte maturation	31	3.9	2.9e-9	1.3e-8
KEGG_PATHWAY	mmu04015:Rap1 signaling pathway	51	6.4	8.6e-9	3.7e-8
KEGG_PATHWAY	mmu05152:Tuberculosis	44	5.5	1.0e-8	4.3e-8
KEGG_PATHWAY	mmu04150:mTOR signaling pathway	24	3.0	1.4e-8	5.7e-8
KEGG_PATHWAY	mmu04622:RIG-I-like receptor signaling pathway	25	3.1	2.3e-8	9.3e-8
KEGG_PATHWAY	mmu04611:Platelet activation	36	4.5	2.9e-8	1.1e-7
KEGG_PATHWAY	mmu04915:Estrogen signaling pathway	31	3.9	4.6e-8	1.8e-7
KEGG_PATHWAY	mmu04261:Adrenergic signaling in cardiomyocytes	38	4.8	2.5e-7	9.6e-7
KEGG_PATHWAY	mmu04520:Adherens junction	24	3.0	2.6e-7	9.7e-7
KEGG_PATHWAY	mmu04144:Endocytosis	53	6.6	3.6e-7	1.3e-6
KEGG_PATHWAY	mmu05100:Bacterial invasion of epithelial cells	27	3.4	3.8e-7	1.4e-6
KEGG_PATHWAY	mmu05010:Alzheimer's disease	40	5.0	3.9e-7	1.4e-6
KEGG_PATHWAY	mmu04120:Ubiquitin mediated proteolysis	35	4.4	6.0e-7	2.1e-6
KEGG_PATHWAY	mmu05218:Melanoma	24	3.0	7.5e-7	2.6e-6
KEGG_PATHWAY	mmu04810:Regulation of actin cytoskeleton	47	5.9	1.1e-6	3.8e-6
KEGG_PATHWAY	mmu04670:Leukocyte transendothelial migration	33	4.1	1.2e-6	3.9e-6
KEGG_PATHWAY	mmu04960:Aldosterone-regulated sodium reabsorption	17	2.1	1.2e-6	3.9e-6
KEGG_PATHWAY	mmu04728:Dopaminergic synapse	34	4.2	1.2e-6	3.9e-6
KEGG_PATHWAY	mmu04114:Oocyte meiosis	30	3.8	2.1e-6	7.0e-6
KEGG_PATHWAY	mmu04530:Tight junction	33	4.1	4.5e-6	1.4e-5
KEGG_PATHWAY	mmu05140:Leishmaniasis	19	2.4	6.6e-6	2.1e-5
KEGG_PATHWAY	mmu04920:Adipocytokine signaling pathway	23	2.9	7.7e-6	2.4e-5
KEGG_PATHWAY	mmu05134:Legionellosis	19	2.4	9.4e-6	2.9e-5
KEGG_PATHWAY	mmu05016:Huntington's disease	37	4.6	1.5e-5	4.5e-5
KEGG_PATHWAY	mmu04024:cAMP signaling pathway	40	5.0	2.0e-5	5.9e-5
KEGG_PATHWAY	mmu05012:Parkinson's disease	32	4.0	2.3e-5	7.0e-5
KEGG_PATHWAY	mmu05202:Transcriptional misregulation in cancer	31	3.9	5.2e-5	0.00015
KEGG_PATHWAY	mmu04923:Regulation of lipolysis in adipocytes	18	2.2	5.4e-5	0.00016
KEGG_PATHWAY	mmu04022:cGMP-PKG signaling pathway	34	4.2	6.0e-5	0.00017
KEGG_PATHWAY	mmu05014:Amyotrophic lateral sclerosis (ALS)	17	2.1	0.00012	0.00033
KEGG_PATHWAY	mmu05146:Amoebiasis	25	3.1	0.00012	0.00033
KEGG_PATHWAY	mmu04110:Cell cycle	30	3.8	0.00013	0.00037
KEGG_PATHWAY	mmu05416:Viral myocarditis	16	2.0	0.00013	0.00037
KEGG_PATHWAY	mmu05219:Bladder cancer	14	1.8	0.00017	0.00046
KEGG_PATHWAY	mmu04390:Hippo signaling pathway	33	4.1	0.0002	0.00053
KEGG_PATHWAY	mmu03015:mRNA surveillance pathway	19	2.4	0.00023	0.00061
KEGG_PATHWAY	mmu04115:p53 signaling pathway	18	2.2	0.00029	0.00075
KEGG_PATHWAY	mmu04141:Protein processing in endoplasmic reticulum	34	4.2	0.00033	0.00084
KEGG_PATHWAY	mmu04750:Inflammatory mediator regulation of TRP channels	24	3.0	0.00057	0.0014
KEGG_PATHWAY	mmu04921:Oxytocin signaling pathway	31	3.9	0.00058	0.0015
KEGG_PATHWAY	mmu04550:Signaling pathways regulating pluripotency of stem cells	29	3.6	0.00094	0.0024
KEGG_PATHWAY	mmu04350:TGF-beta signaling pathway	21	2.6	0.0012	0.0029
KEGG_PATHWAY	mmu04070:Phosphatidylinositol signaling system	18	2.2	0.0014	0.0033
KEGG_PATHWAY	mmu04973:Carbohydrate digestion and absorption	12	1.5	0.002	0.0049
KEGG_PATHWAY	mmu05132:Salmonella infection	19	2.4	0.0023	0.0054
KEGG_PATHWAY	mmu04912:GnRH signaling pathway	19	2.4	0.0027	0.0064
KEGG_PATHWAY	mmu05216:Thyroid cancer	9	1.1	0.0045	0.011
KEGG_PATHWAY	mmu04310:Wnt signaling pathway	26	3.2	0.006	0.014
KEGG_PATHWAY	mmu05340:Primary immunodeficiency	11	1.4	0.0069	0.016
KEGG_PATHWAY	mmu04730:Long-term depression	13	1.6	0.014	0.032
KEGG_PATHWAY	mmu04720:Long-term potentiation	14	1.8	0.015	0.034
KEGG_PATHWAY	mmu04623:Cytosolic DNA-sensing pathway	13	1.6	0.016	0.037
KEGG_PATHWAY	mmu04725:Cholinergic synapse	20	2.5	0.019	0.042
KEGG_PATHWAY	mmu04710:Circadian rhythm	9	1.1	0.022	0.047
KEGG_PATHWAY	mmu05034:Alcoholism	23	2.9	0.025	0.053
KEGG_PATHWAY	mmu00190:Oxidative phosphorylation	20	2.5	0.029	0.063
KEGG_PATHWAY	mmu04612:Antigen processing and presentation	11	1.4	0.038	0.079
KEGG_PATHWAY	mmu04721:Synaptic vesicle cycle	11	1.4	0.038	0.079
KEGG_PATHWAY	mmu04360:Axon guidance	21	2.6	0.05	0.1
KEGG_PATHWAY	mmu05321:Inflammatory bowel disease (IBD)	11	1.4	0.05	0.1
KEGG_PATHWAY	mmu05020:Prion diseases	8	1.0	0.051	0.1
KEGG_PATHWAY	mmu04540:Gap junction	15	1.9	0.055	0.11
KEGG_PATHWAY	mmu00220:Arginine biosynthesis	6	0.8	0.058	0.12
KEGG_PATHWAY	mmu00562:Inositol phosphate metabolism	11	1.4	0.083	0.16
KEGG_PATHWAY	mmu04640:Hematopoietic cell lineage	14	1.8	0.084	0.16
KEGG_PATHWAY	mmu04142:Lysosome	17	2.1	0.089	0.17